Protein disulfides with peroxiredoxin IV and PDI peroxidases

Published on Author Colin Thorpe

Two distinct types of flavin-linked oxidases catalyze the generation of protein disulfide bonds in the secretory apparatus of mammals.  The Ero1α and – β isoforms oxidize protein disulfide isomerases (PDI) leading to the net generation of disulfide bonds as shown in Figure A.  Here, PDI is the immediate oxidant for unfolded reduced proteins. In contrast,… Continue reading Protein disulfides with peroxiredoxin IV and PDI peroxidases

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A human mitochondrial sulfhydryl oxidase mutant characterized

Published on Author Colin Thorpe

In 2009, Comi and coworkers (Di Fonzo et al., PubMed) identified the point mutation that caused three children of consanguineous parents to develop cataract, progressive muscle weakness, hearing loss and developmental delay.  The mutant protein was a mitochondrial sulfhydryl oxidase: augmenter of liver regeneration (here abbreviated ALR).  The long form of ALR is resident in… Continue reading A human mitochondrial sulfhydryl oxidase mutant characterized

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Ero1, diabetes, and the degeneracy of oxidative folding pathways

Published on Author Colin Thorpe

In a mouse In a far-reaching study published in the March 22 issue of JCB (Zito et al., 2010), David Ron and coworkers have investigated the biological consequences of disruption of the Ero1α and β isoforms in the mouse – the first such study in a living mammal.  The Ero1 proteins are believed to generate… Continue reading Ero1, diabetes, and the degeneracy of oxidative folding pathways

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QSOX – a structural puzzle solved

Published on Author Colin Thorpe

Depending on the source, QSOX sequences start with one or two thioredoxin domains (the bar diagram is for metazoans).  The remaining two domains are common to all QSOXs: a helix-rich region (HRR) and a flavin-binding domain (Erv/ALR, yellow).  The latter is the engine of QSOX catalysis – driving the generation of disulfide bonds and reducing… Continue reading QSOX – a structural puzzle solved

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An enzymological malapropism – oxidoreductase not “oxidase”!

Published on Author Colin Thorpe

The activity that came to be named protein disulfide isomerase (PDI) was uncovered independently by Straub and Anfinsen in 1963.  PDI was assigned an enzyme classification number (EC 5.3.4.1) in 1972: EC 5…        corresponds to “isomerase” EC 5.3…     corresponds to “intramolecular oxidoreductases” EC 5.3.4.    designation is for the category “transposing S-S bonds”. So PDI is… Continue reading An enzymological malapropism – oxidoreductase not “oxidase”!

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Prostate cancer and the expression of QSOX1

Published on Author Colin Thorpe

A recent paper:  Loss of Nkx3.1 leads to the activation of discrete downstream target genes during prostate tumorigenesis. Oncogene. 2009 Sep 17;28(37):3307-19. Epub 2009 Jul 13 [PubMed] Song H, Zhang B, Watson MA, Humphrey PA, Lim H, Milbrandt J. Song et al. have shown that loss of the androgen-regulated transcriptional regulator NKX3.1 leads to over-expression… Continue reading Prostate cancer and the expression of QSOX1

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NOTCH: Ero1L and QSOX3

Published on Author Colin Thorpe

NOTCH signaling in Drosophila: disulfide bonds introduced by both Ero1L and QSOX3! The paper:  Ero1L, a thiol oxidase, is required for Notch signaling through cysteine bridge formation of the Lin12-Notch repeats in Drosophila melanogaster. Tien AC, Rajan A, Schulze KL, Ryoo HD, Acar M, Steller H, Bellen HJ. J Cell Biol. 2008 Sep 22;182(6):1113-25. [Link… Continue reading NOTCH: Ero1L and QSOX3

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QSOX1 in the plasma peptidome of pancreatic cancer patients

Published on Author Colin Thorpe

The paper:  Analysis of the plasma peptidome from pancreas cancer patients connects a peptide in plasma to overexpression of the parent protein in tumors. Antwi K, Hostetter G, Demeure MJ, Katchman BA, Decker GA, Ruiz Y, Sielaff TD, Koep LJ, Lake DF. J Proteome Res. 2009 Oct;8(10):4722-31. [PubMed] It is known that differential splicing of… Continue reading QSOX1 in the plasma peptidome of pancreatic cancer patients

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